Hi slimjim, what ph is the water that you normally use, when I did my hemp you grows, I kept ph between 5.6 and went up to 5.8-6.0 in heavy flower. I assume coco would be the same.
I apologise if you are watering at a ph in the 5.5-6.0 range, just unsure after reading above. If your ph is normally this high, yes it would kill your seedlings.
Also runoff seems high from just water, I would say pre rinsing is needed.
Do remember reading a couple of grow journals in the past where coco growers have pre washed, then soaked coco in cal/ mag prior to use. If I remember correctly coco finds it hard to hold on to minerals due to it being an inert medium. Like I said have never used, only perlight in hempy ( used to heavily pre wash perlight, then leave to soak in ph 5.5 water for 24 hours) so would advise having a read on some coco threads.
Good luck.